OBO Foundry dashboard analysis¶

Back to dashboard main page 
/tmp/ipykernel_4830/4293058459.py:21: FutureWarning:

The `inplace` parameter in pandas.Categorical.reorder_categories is deprecated and will be removed in a future version. Reordering categories will always return a new Categorical object.

Ontologies by number of axioms

Ontologies by number of classes

Ontologies by how many ontologies use it

Different serialisations used

RDF/XML Syntax           29
Turtle                   27
unknown                   2
OWL Functional Syntax     1
OWL/XML Syntax            1
Name: syntax, dtype: int64

Breakdown of used Axiom Types

count mean std min 25% 50% 75% max
AnnotationAssertion 57 5616.166667 20080.715489 0.0 159.00 645.0 2246.25 124680.0
Declaration 57 1081.766667 3227.585120 0.0 87.00 295.0 848.25 22818.0
SubClassOf 55 1361.783333 4366.135432 0.0 20.75 224.0 878.00 24611.0
ObjectPropertyRange 51 34.116667 36.311782 0.0 11.50 25.0 44.00 150.0
ObjectPropertyDomain 50 32.050000 36.060413 0.0 8.00 22.0 42.00 148.0
DataPropertyRange 46 12.400000 18.227563 0.0 1.00 5.0 17.00 97.0
SubObjectPropertyOf 44 45.316667 64.507913 0.0 0.00 16.0 58.50 282.0
InverseObjectProperties 42 12.300000 25.744705 0.0 0.00 2.0 11.75 126.0
DataPropertyDomain 41 12.350000 32.169480 0.0 0.00 2.0 8.75 235.0
ClassAssertion 38 122.450000 368.047364 0.0 0.00 2.5 22.25 1952.0
DisjointClasses 38 224.150000 1583.366889 0.0 0.00 2.5 20.25 12277.0
EquivalentClasses 34 146.933333 793.627306 0.0 0.00 2.5 61.25 6154.0
SubDataPropertyOf 30 6.466667 11.607225 0.0 0.00 0.5 10.00 63.0
TransitiveObjectProperty 29 3.666667 6.379699 0.0 0.00 0.0 5.00 30.0
SubAnnotationPropertyOf 27 11.566667 32.974241 0.0 0.00 0.0 8.50 228.0
FunctionalObjectProperty 25 2.466667 4.135283 0.0 0.00 0.0 4.00 17.0
FunctionalDataProperty 23 1.666667 3.934492 0.0 0.00 0.0 2.00 22.0
InverseFunctionalObjectProperty 21 1.616667 3.081336 0.0 0.00 0.0 1.00 12.0
SymmetricObjectProperty 20 2.933333 6.100477 0.0 0.00 0.0 2.50 35.0
IrrefexiveObjectProperty 19 2.883333 6.095543 0.0 0.00 0.0 1.00 24.0
AnnotationPropertyRangeOf 19 5.333333 18.224278 0.0 0.00 0.0 1.25 134.0
AsymmetricObjectProperty 17 2.516667 5.481840 0.0 0.00 0.0 1.00 20.0
ObjectPropertyAssertion 16 249.866667 1344.521961 0.0 0.00 0.0 2.00 10226.0
DataPropertyAssertion 14 103.983333 491.992093 0.0 0.00 0.0 0.00 3617.0
DisjointUnion 12 5.316667 16.965060 0.0 0.00 0.0 0.00 116.0
SubPropertyChainOf 10 3.016667 15.732393 0.0 0.00 0.0 0.00 120.0
AnnotationPropertyDomain 8 0.233333 0.851055 0.0 0.00 0.0 0.00 6.0
EquivalentObjectProperties 7 1.100000 4.870179 0.0 0.00 0.0 0.00 36.0
DifferentIndividuals 6 0.316667 1.157022 0.0 0.00 0.0 0.00 6.0
DisjointObjectProperties 6 0.383333 1.563261 0.0 0.00 0.0 0.00 10.0
ReflexiveObjectProperty 6 0.133333 0.468198 0.0 0.00 0.0 0.00 3.0
SameIndividual 3 0.516667 2.507559 0.0 0.00 0.0 0.00 17.0
Rule 3 0.633333 3.439386 0.0 0.00 0.0 0.00 25.0
EquivalentDataProperties 3 0.316667 1.512565 0.0 0.00 0.0 0.00 10.0
NegativeObjectPropertyAssertion 2 0.033333 0.181020 0.0 0.00 0.0 0.00 1.0
DatatypeDefinition 2 0.333333 2.454098 0.0 0.00 0.0 0.00 19.0
DisjointDataProperties 1 0.033333 0.258199 0.0 0.00 0.0 0.00 2.0

Breakdown of used OWL Class Expression constructs

count mean std min 25% 50% 75% max
Class 58 4755.250000 13949.051494 0.0 164.0 930.5 2579.00 78659.0
ObjectUnionOf 40 13.900000 21.432353 0.0 0.0 4.5 13.25 88.0
ObjectAllValuesFrom 35 26.483333 59.367140 0.0 0.0 4.0 32.75 400.0
ObjectSomeValuesFrom 32 387.266667 2150.442563 0.0 0.0 2.5 85.50 16630.0
ObjectExactCardinality 28 5.466667 16.400152 0.0 0.0 0.0 4.25 115.0
ObjectIntersectionOf 28 132.550000 804.112152 0.0 0.0 0.0 17.50 6224.0
DataExactCardinality 23 2.466667 4.232508 0.0 0.0 0.0 3.25 18.0
DataAllValuesFrom 18 1.050000 2.061964 0.0 0.0 0.0 1.25 9.0
DataHasValue 17 26.666667 75.334658 0.0 0.0 0.0 3.25 494.0
ObjectComplementOf 15 4.816667 23.307445 0.0 0.0 0.0 0.25 179.0
ObjectHasValue 14 8.883333 32.085211 0.0 0.0 0.0 0.00 189.0
DataSomeValuesFrom 14 1.350000 3.271992 0.0 0.0 0.0 0.00 17.0
ObjectMinCardinality 13 1.416667 4.243806 0.0 0.0 0.0 0.00 28.0
ObjectOneOf 11 12.450000 53.343284 0.0 0.0 0.0 0.00 272.0
ObjectMaxCardinality 10 15.716667 115.379711 0.0 0.0 0.0 0.00 894.0
DataMaxCardinality 6 1.700000 8.287831 0.0 0.0 0.0 0.00 61.0
DataMinCardinality 4 0.283333 1.814178 0.0 0.0 0.0 0.00 14.0
ObjectHasSelf 1 0.016667 0.129099 0.0 0.0 0.0 0.00 1.0

OBO Score (Experimental)

ontology score score_dash score_impact
17 FOAF 0.350 0.333 0.367
35 PATO 0.345 0.556 0.133
30 OBO 0.335 0.571 0.100
37 PROVO 0.310 0.504 0.117
19 IAO 0.300 0.600 0.000
22 MDO 0.285 0.571 0.000
0 AMONTOLOGY 0.285 0.571 0.000
31 OEO 0.285 0.571 0.000
49 enanomapper 0.285 0.571 0.000
13 EMMO_crystallography 0.275 0.549 0.000
4 CHAMEO 0.275 0.549 0.000
38 QUDT 0.275 0.549 0.000
8 EMMO 0.275 0.549 0.000
15 EMMO_mechanical_testing 0.264 0.527 0.000
11 EMMO_Datamodel 0.264 0.527 0.000
2 BWMD-MID 0.252 0.504 0.000
41 SEMMD 0.252 0.504 0.000
3 CCO 0.252 0.504 0.000
12 EMMO_atomistic 0.252 0.504 0.000
1 BWMD-DOMAIN 0.252 0.504 0.000
14 EMMO_mappings 0.252 0.504 0.000
50 m4i 0.241 0.482 0.000
40 SAREF 0.241 0.482 0.000
16 EMMO_microstructure 0.234 0.467 0.000
43 SO 0.234 0.467 0.000
27 NPO 0.234 0.467 0.000
32 OM 0.234 0.467 0.000
46 UO 0.234 0.467 0.000
6 DEB 0.234 0.467 0.000
44 SP 0.234 0.467 0.000
21 MAMBO 0.234 0.467 0.000
26 MaterialsMine 0.222 0.444 0.000
53 mvc 0.222 0.444 0.000
5 CIF 0.222 0.444 0.000
55 nfdicore 0.222 0.444 0.000
7 DISO 0.222 0.444 0.000
29 OA 0.222 0.444 0.000
36 PMD 0.222 0.444 0.000
51 mat 0.222 0.444 0.000
24 MSEO 0.222 0.444 0.000
28 NanoMine 0.222 0.444 0.000
18 GPO 0.222 0.444 0.000
25 MatOnto 0.222 0.444 0.000
20 LPBFO 0.219 0.438 0.000
23 MOL_TENSILE 0.208 0.416 0.000
47 WILD 0.200 0.400 0.000
34 P-Plan 0.200 0.400 0.000
58 periodictable 0.200 0.400 0.000
42 SKOS_MDO 0.200 0.400 0.000
57 opmw 0.200 0.400 0.000
48 bmo 0.189 0.378 0.000
45 SSN 0.189 0.378 0.000
33 OSMO 0.189 0.378 0.000
54 mwo 0.189 0.378 0.000
52 matinfo 0.167 0.333 0.000
39 QUDV 0.167 0.333 0.000
59 ssos 0.155 0.311 0.000
56 ontorule 0.155 0.311 0.000
9 EMMO_BVC 0.000 0.000 0.000
10 EMMO_BattINFO 0.000 0.000 0.000

OBO Score Summary

count mean std min 25% 50% 75% max
score 60.0 0.229417 0.060127 0.0 0.206 0.2340 0.255 0.350
score_dash 60.0 0.446733 0.109065 0.0 0.400 0.4555 0.504 0.600
score_impact 60.0 0.011950 0.053282 0.0 0.000 0.0000 0.000 0.367

OBO dependency graph